Setting UseMsdeployExe property in the targets file, as described here: http://blogs.msdn.com/b/webdevtools/archive/2010/11/03/web-deploy-how-to-see-the-command-executed-in-visual-studio-during-publish.aspx results in Visual Studio generating invalid parameters for calling MsDeploy, when you have web.config transformations taking place.
Visual Studio/Silverlight/Tooling version
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